songlab/clinvar_vs_benign · Datasets at Hugging Face

chrom stringclasses 24 values	pos int64 45.7k 248M	ref stringclasses 4 values	alt stringclasses 4 values	label stringclasses 2 values	id stringlengths 1 7	review_status stringclasses 5 values	consequence stringclasses 77 values
1	1,815,796	G	C	Pathogenic	1321652	criteria_provided,_single_submitter	intron_variant,missense_variant
1	1,817,857	C	T	Benign	2076600	criteria_provided,_single_submitter	intron_variant,missense_variant
1	1,916,758	G	C	Benign	783273	criteria_provided,_single_submitter	missense_variant
1	1,923,833	C	G	Pathogenic	2443734	no_assertion_criteria_provided	missense_variant
1	1,927,024	C	T	Pathogenic	2443732	no_assertion_criteria_provided	missense_variant
1	1,970,722	C	T	Pathogenic	2443731	no_assertion_criteria_provided	missense_variant
1	1,974,047	G	A	Pathogenic	2443733	no_assertion_criteria_provided	missense_variant
1	2,029,197	C	G	Pathogenic	1805963	criteria_provided,_single_submitter	missense_variant
1	2,055,515	G	A	Benign	714063	criteria_provided,_single_submitter	missense_variant
1	2,228,825	C	T	Pathogenic	409969	criteria_provided,_single_submitter	missense_variant
1	2,228,828	T	G	Pathogenic	224869	criteria_provided,_single_submitter	missense_variant
1	2,228,848	T	A	Pathogenic	2202692	criteria_provided,_single_submitter	missense_variant
1	2,228,857	T	C	Pathogenic	692060	criteria_provided,_single_submitter	missense_variant
1	2,228,860	C	G	Pathogenic	37259	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	2,228,866	G	C	Pathogenic	2225761	criteria_provided,_single_submitter	missense_variant
1	2,228,866	G	T	Pathogenic	37262	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	2,228,867	G	A	Pathogenic	37260	criteria_provided,_single_submitter	missense_variant
1	2,228,867	G	T	Pathogenic	39783	criteria_provided,_single_submitter	missense_variant
1	2,228,869	C	T	Pathogenic	39786	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	2,229,031	C	T	Pathogenic	944376	criteria_provided,_single_submitter	missense_variant
1	2,406,526	G	C	Pathogenic	6771	no_assertion_criteria_provided	missense_variant,non-coding_transcript_variant
1	2,406,569	C	G	Pathogenic	1686018	criteria_provided,_single_submitter	missense_variant,non-coding_transcript_variant
1	2,408,617	C	T	Benign	559056	criteria_provided,_multiple_submitters,_no_conflicts	initiatior_codon_variant,missense_variant,non-coding_transcript_variant
1	2,408,720	A	G	Benign	559058	criteria_provided,_multiple_submitters,_no_conflicts	5_prime_UTR_variant,missense_variant,non-coding_transcript_variant
1	2,412,501	A	G	Pathogenic	162434	criteria_provided,_multiple_submitters,_no_conflicts	initiatior_codon_variant,intron_variant,missense_variant
1	2,412,502	T	A	Pathogenic	1410903	criteria_provided,_single_submitter	initiatior_codon_variant,intron_variant,missense_variant
1	2,476,671	G	C	Benign	779852	criteria_provided,_single_submitter	5_prime_UTR_variant,intron_variant,missense_variant
1	2,479,937	G	A	Benign	713841	criteria_provided,_single_submitter	missense_variant
1	2,504,320	G	A	Benign	787198	criteria_provided,_single_submitter	3_prime_UTR_variant,missense_variant
1	2,591,973	C	T	Benign	737413	criteria_provided,_single_submitter	missense_variant
1	2,604,193	T	C	Benign	712823	criteria_provided,_single_submitter	missense_variant
1	2,605,602	T	G	Benign	727107	criteria_provided,_single_submitter	missense_variant
1	3,411,763	G	T	Benign	474407	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	3,411,794	T	C	Benign	227026	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	3,414,616	T	C	Pathogenic	60729	no_assertion_criteria_provided	missense_variant
1	3,426,071	C	T	Benign	227034	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	3,430,888	G	A	Benign	60727	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	3,478,438	T	C	Benign	780210	criteria_provided,_single_submitter	missense_variant
1	3,490,548	C	T	Benign	786447	criteria_provided,_single_submitter	missense_variant
1	3,495,901	C	T	Benign	719697	criteria_provided,_single_submitter	missense_variant
1	3,498,793	C	T	Benign	710836	criteria_provided,_single_submitter	missense_variant
1	3,499,609	G	A	Benign	720893	criteria_provided,_single_submitter	missense_variant
1	3,501,198	C	T	Benign	712404	criteria_provided,_single_submitter	missense_variant
1	3,501,835	G	A	Benign	785924	criteria_provided,_single_submitter	missense_variant
1	3,514,574	C	A	Benign	711682	criteria_provided,_single_submitter	missense_variant
1	3,515,461	C	T	Benign	785926	criteria_provided,_single_submitter	missense_variant
1	3,602,598	G	A	Benign	791772	criteria_provided,_single_submitter	missense_variant
1	3,727,758	G	A	Benign	714065	criteria_provided,_single_submitter	missense_variant
1	3,752,792	G	A	Benign	788937	criteria_provided,_single_submitter	missense_variant
1	3,823,181	C	T	Benign	1168388	criteria_provided,_single_submitter	missense_variant
1	3,826,391	G	A	Benign	1165705	criteria_provided,_single_submitter	missense_variant
1	3,829,360	G	A	Benign	1170301	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	3,836,499	G	T	Benign	1274595	criteria_provided,_single_submitter	missense_variant
1	3,836,572	A	T	Benign	1166783	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	4,711,974	C	T	Benign	787731	criteria_provided,_single_submitter	missense_variant
1	4,712,475	G	A	Benign	778204	criteria_provided,_single_submitter	missense_variant
1	5,867,109	G	A	Benign	220304	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant,non-coding_transcript_variant
1	5,874,557	G	A	Benign	1599216	criteria_provided,_single_submitter	missense_variant,non-coding_transcript_variant
1	5,874,946	A	G	Pathogenic	3402	no_assertion_criteria_provided	missense_variant,non-coding_transcript_variant
1	5,877,098	C	T	Benign	260550	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant,non-coding_transcript_variant
1	5,904,794	C	T	Benign	194659	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant,non-coding_transcript_variant
1	5,909,165	G	C	Benign	215518	criteria_provided,_multiple_submitters,_no_conflicts	intron_variant,missense_variant,non-coding_transcript_variant
1	5,986,168	G	A	Benign	1626035	criteria_provided,_single_submitter	5_prime_UTR_variant,intron_variant,missense_variant,non-coding_transcript_variant
1	5,986,204	G	A	Benign	260561	criteria_provided,_multiple_submitters,_no_conflicts	5_prime_UTR_variant,intron_variant,missense_variant,non-coding_transcript_variant
1	6,218,354	A	G	Benign	1274153	criteria_provided,_single_submitter	missense_variant
1	6,250,564	C	T	Benign	783275	criteria_provided,_single_submitter	missense_variant
1	6,254,688	C	T	Benign	783276	criteria_provided,_single_submitter	missense_variant
1	6,425,205	G	T	Benign	668259	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	6,440,656	C	G	Benign	508587	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	6,444,559	C	T	Benign	178607	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	6,445,735	C	T	Benign	1228456	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	6,445,736	G	A	Benign	676419	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	6,448,812	C	T	Benign	508563	criteria_provided,_multiple_submitters,_no_conflicts	intron_variant,missense_variant
1	6,448,885	C	T	Benign	445819	criteria_provided,_multiple_submitters,_no_conflicts	intron_variant,missense_variant
1	6,449,070	C	T	Benign	1182246	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	6,451,926	A	C	Pathogenic	4420	no_assertion_criteria_provided	missense_variant
1	6,452,092	G	A	Pathogenic	4422	no_assertion_criteria_provided	missense_variant
1	6,468,009	C	G	Benign	287488	criteria_provided,_multiple_submitters,_no_conflicts	intron_variant,missense_variant
1	6,468,242	T	C	Benign	235230	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	6,468,260	C	T	Benign	287487	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	6,468,408	C	T	Benign	285567	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	6,471,064	T	C	Benign	297958	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	6,471,529	C	T	Benign	297959	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	6,473,333	G	C	Benign	198895	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	6,473,355	C	T	Benign	198896	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	6,475,089	A	G	Benign	297975	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	6,485,330	A	T	Benign	380863	criteria_provided,_single_submitter	intron_variant,missense_variant
1	6,574,673	C	G	Benign	709202	criteria_provided,_single_submitter	intron_variant,missense_variant
1	6,575,249	C	A	Benign	775497	criteria_provided,_single_submitter	intron_variant,missense_variant
1	6,578,865	C	T	Benign	767648	criteria_provided,_single_submitter	missense_variant
1	6,578,866	G	A	Benign	775498	criteria_provided,_single_submitter	missense_variant
1	7,249,591	G	A	Pathogenic	1691186	criteria_provided,_single_submitter	missense_variant
1	7,249,592	A	G	Pathogenic	1342309	no_assertion_criteria_provided	missense_variant
1	7,249,611	G	C	Pathogenic	973014	criteria_provided,_single_submitter	missense_variant
1	7,664,159	T	A	Benign	732186	criteria_provided,_single_submitter	missense_variant
1	7,664,637	C	T	Benign	712671	criteria_provided,_single_submitter	missense_variant
1	7,732,460	G	A	Benign	788497	criteria_provided,_single_submitter	5_prime_UTR_variant,missense_variant
1	7,737,443	C	G	Benign	128565	criteria_provided,_multiple_submitters,_no_conflicts	missense_variant
1	7,737,468	G	A	Benign	2170333	criteria_provided,_single_submitter	missense_variant
1	7,737,474	C	T	Benign	770110	criteria_provided,_single_submitter	missense_variant

1

1,815,796

G

C

Pathogenic

1321652

criteria_provided,_single_submitter

intron_variant,missense_variant

1

1,817,857

C

T

Benign

2076600

criteria_provided,_single_submitter

intron_variant,missense_variant

1

1,916,758

G

C

Benign

783273

criteria_provided,_single_submitter

missense_variant

1

1,923,833

C

G

Pathogenic

2443734

no_assertion_criteria_provided

missense_variant

1

1,927,024

C

T

Pathogenic

2443732

no_assertion_criteria_provided

missense_variant

1

1,970,722

C

T

Pathogenic

2443731

no_assertion_criteria_provided

missense_variant

1

1,974,047

G

A

Pathogenic

2443733

no_assertion_criteria_provided

missense_variant

1

2,029,197

C

G

Pathogenic

1805963

criteria_provided,_single_submitter

missense_variant

1

2,055,515

G

A

Benign

714063

criteria_provided,_single_submitter

missense_variant

1

2,228,825

C

T

Pathogenic

409969

criteria_provided,_single_submitter

missense_variant

1

2,228,828

T

G

Pathogenic

224869

criteria_provided,_single_submitter

missense_variant

1

2,228,848

T

A

Pathogenic

2202692

criteria_provided,_single_submitter

missense_variant

1

2,228,857

T

C

Pathogenic

692060

criteria_provided,_single_submitter

missense_variant

1

2,228,860

C

G

Pathogenic

37259

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

2,228,866

G

C

Pathogenic

2225761

criteria_provided,_single_submitter

missense_variant

1

2,228,866

G

T

Pathogenic

37262

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

2,228,867

G

A

Pathogenic

37260

criteria_provided,_single_submitter

missense_variant

1

2,228,867

G

T

Pathogenic

39783

criteria_provided,_single_submitter

missense_variant

1

2,228,869

C

T

Pathogenic

39786

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

2,229,031

C

T

Pathogenic

944376

criteria_provided,_single_submitter

missense_variant

1

2,406,526

G

C

Pathogenic

6771

no_assertion_criteria_provided

missense_variant,non-coding_transcript_variant

1

2,406,569

C

G

Pathogenic

1686018

criteria_provided,_single_submitter

missense_variant,non-coding_transcript_variant

1

2,408,617

C

T

Benign

559056

criteria_provided,_multiple_submitters,_no_conflicts

initiatior_codon_variant,missense_variant,non-coding_transcript_variant

1

2,408,720

A

G

Benign

559058

criteria_provided,_multiple_submitters,_no_conflicts

5_prime_UTR_variant,missense_variant,non-coding_transcript_variant

1

2,412,501

A

G

Pathogenic

162434

criteria_provided,_multiple_submitters,_no_conflicts

initiatior_codon_variant,intron_variant,missense_variant

1

2,412,502

T

A

Pathogenic

1410903

criteria_provided,_single_submitter

initiatior_codon_variant,intron_variant,missense_variant

1

2,476,671

G

C

Benign

779852

criteria_provided,_single_submitter

5_prime_UTR_variant,intron_variant,missense_variant

1

2,479,937

G

A

Benign

713841

criteria_provided,_single_submitter

missense_variant

1

2,504,320

G

A

Benign

787198

criteria_provided,_single_submitter

3_prime_UTR_variant,missense_variant

1

2,591,973

C

T

Benign

737413

criteria_provided,_single_submitter

missense_variant

1

2,604,193

T

C

Benign

712823

criteria_provided,_single_submitter

missense_variant

1

2,605,602

T

G

Benign

727107

criteria_provided,_single_submitter

missense_variant

1

3,411,763

G

T

Benign

474407

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

3,411,794

T

C

Benign

227026

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

3,414,616

T

C

Pathogenic

60729

no_assertion_criteria_provided

missense_variant

1

3,426,071

C

T

Benign

227034

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

3,430,888

G

A

Benign

60727

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

3,478,438

T

C

Benign

780210

criteria_provided,_single_submitter

missense_variant

1

3,490,548

C

T

Benign

786447

criteria_provided,_single_submitter

missense_variant

1

3,495,901

C

T

Benign

719697

criteria_provided,_single_submitter

missense_variant

1

3,498,793

C

T

Benign

710836

criteria_provided,_single_submitter

missense_variant

1

3,499,609

G

A

Benign

720893

criteria_provided,_single_submitter

missense_variant

1

3,501,198

C

T

Benign

712404

criteria_provided,_single_submitter

missense_variant

1

3,501,835

G

A

Benign

785924

criteria_provided,_single_submitter

missense_variant

1

3,514,574

C

A

Benign

711682

criteria_provided,_single_submitter

missense_variant

1

3,515,461

C

T

Benign

785926

criteria_provided,_single_submitter

missense_variant

1

3,602,598

G

A

Benign

791772

criteria_provided,_single_submitter

missense_variant

1

3,727,758

G

A

Benign

714065

criteria_provided,_single_submitter

missense_variant

1

3,752,792

G

A

Benign

788937

criteria_provided,_single_submitter

missense_variant

1

3,823,181

C

T

Benign

1168388

criteria_provided,_single_submitter

missense_variant

1

3,826,391

G

A

Benign

1165705

criteria_provided,_single_submitter

missense_variant

1

3,829,360

G

A

Benign

1170301

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

3,836,499

G

T

Benign

1274595

criteria_provided,_single_submitter

missense_variant

1

3,836,572

A

T

Benign

1166783

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

4,711,974

C

T

Benign

787731

criteria_provided,_single_submitter

missense_variant

1

4,712,475

G

A

Benign

778204

criteria_provided,_single_submitter

missense_variant

1

5,867,109

G

A

Benign

220304

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant,non-coding_transcript_variant

1

5,874,557

G

A

Benign

1599216

criteria_provided,_single_submitter

missense_variant,non-coding_transcript_variant

1

5,874,946

A

G

Pathogenic

3402

no_assertion_criteria_provided

missense_variant,non-coding_transcript_variant

1

5,877,098

C

T

Benign

260550

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant,non-coding_transcript_variant

1

5,904,794

C

T

Benign

194659

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant,non-coding_transcript_variant

1

5,909,165

G

C

Benign

215518

criteria_provided,_multiple_submitters,_no_conflicts

intron_variant,missense_variant,non-coding_transcript_variant

1

5,986,168

G

A

Benign

1626035

criteria_provided,_single_submitter

5_prime_UTR_variant,intron_variant,missense_variant,non-coding_transcript_variant

1

5,986,204

G

A

Benign

260561

criteria_provided,_multiple_submitters,_no_conflicts

5_prime_UTR_variant,intron_variant,missense_variant,non-coding_transcript_variant

1

6,218,354

A

G

Benign

1274153

criteria_provided,_single_submitter

missense_variant

1

6,250,564

C

T

Benign

783275

criteria_provided,_single_submitter

missense_variant

1

6,254,688

C

T

Benign

783276

criteria_provided,_single_submitter

missense_variant

1

6,425,205

G

T

Benign

668259

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

6,440,656

C

G

Benign

508587

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

6,444,559

C

T

Benign

178607

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

6,445,735

C

T

Benign

1228456

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

6,445,736

G

A

Benign

676419

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

6,448,812

C

T

Benign

508563

criteria_provided,_multiple_submitters,_no_conflicts

intron_variant,missense_variant

1

6,448,885

C

T

Benign

445819

criteria_provided,_multiple_submitters,_no_conflicts

intron_variant,missense_variant

1

6,449,070

C

T

Benign

1182246

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

6,451,926

A

C

Pathogenic

4420

no_assertion_criteria_provided

missense_variant

1

6,452,092

G

A

Pathogenic

4422

no_assertion_criteria_provided

missense_variant

1

6,468,009

C

G

Benign

287488

criteria_provided,_multiple_submitters,_no_conflicts

intron_variant,missense_variant

1

6,468,242

T

C

Benign

235230

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

6,468,260

C

T

Benign

287487

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

6,468,408

C

T

Benign

285567

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

6,471,064

T

C

Benign

297958

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

6,471,529

C

T

Benign

297959

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

6,473,333

G

C

Benign

198895

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

6,473,355

C

T

Benign

198896

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

6,475,089

A

G

Benign

297975

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

6,485,330

A

T

Benign

380863

criteria_provided,_single_submitter

intron_variant,missense_variant

1

6,574,673

C

G

Benign

709202

criteria_provided,_single_submitter

intron_variant,missense_variant

1

6,575,249

C

A

Benign

775497

criteria_provided,_single_submitter

intron_variant,missense_variant

1

6,578,865

C

T

Benign

767648

criteria_provided,_single_submitter

missense_variant

1

6,578,866

G

A

Benign

775498

criteria_provided,_single_submitter

missense_variant

1

7,249,591

G

A

Pathogenic

1691186

criteria_provided,_single_submitter

missense_variant

1

7,249,592

A

G

Pathogenic

1342309

no_assertion_criteria_provided

missense_variant

1

7,249,611

G

C

Pathogenic

973014

criteria_provided,_single_submitter

missense_variant

1

7,664,159

T

A

Benign

732186

criteria_provided,_single_submitter

missense_variant

1

7,664,637

C

T

Benign

712671

criteria_provided,_single_submitter

missense_variant

1

7,732,460

G

A

Benign

788497

criteria_provided,_single_submitter

5_prime_UTR_variant,missense_variant

1

7,737,443

C

G

Benign

128565

criteria_provided,_multiple_submitters,_no_conflicts

missense_variant

1

7,737,468

G

A

Benign

2170333

criteria_provided,_single_submitter

missense_variant

1

7,737,474

C

T

Benign

770110

criteria_provided,_single_submitter

missense_variant